world-ecoregion/nn.py

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2019-02-27 11:36:20 +00:00
from __future__ import absolute_import, division, print_function
# TensorFlow and tf.keras
import tensorflow as tf
from tensorflow import keras
# Helper libraries
import numpy as np
import matplotlib.pyplot as plt
import pandas as pd
import os.path
from utils import *
RANDOM_SEED = 1
tf.enable_eager_execution()
tf.set_random_seed(RANDOM_SEED)
np.random.seed(RANDOM_SEED)
df = pd.read_pickle('data_final.p')
class Model():
def __init__(self, name, batch_size=100, shuffle_buffer_size=500, learning_rate=0.001, epochs=1):
self.name = name
self.path = "checkpoints/{}.hdf5".format(name)
self.batch_size = batch_size
self.shuffle_buffer_size = shuffle_buffer_size
self.learning_rate = learning_rate
self.epochs = epochs
def prepare_dataset(self, df, fn):
self.dataset_fn = fn
dataset_size, features, output_size, dataset = fn(df)
self.dataset = dataset.shuffle(self.shuffle_buffer_size)
self.TRAIN_SIZE = int(dataset_size * 0.85)
self.TEST_SIZE = dataset_size - self.TRAIN_SIZE
(training, test) = (self.dataset.take(self.TRAIN_SIZE).batch(self.batch_size).repeat(),
self.dataset.skip(self.TRAIN_SIZE).batch(self.batch_size).repeat())
self.dataset_size = dataset_size
self.features = features
self.output_size = output_size
self.training = training
self.test = test
def create_model(self, layers):
self.model = keras.Sequential([
keras.layers.Dense(layers[0], activation=tf.nn.relu, input_shape=[self.features])
] + [
keras.layers.Dense(n, activation=tf.nn.relu) for n in layers[1:]
] + [
keras.layers.Dense(self.output_size)
])
def compile(self):
self.model.load_weights(self.path)
optimizer = tf.train.AdamOptimizer(self.learning_rate)
self.model.compile(loss='mse',
optimizer=optimizer,
metrics=['mae', 'accuracy'])
def evaluate(self):
return self.model.evaluate(
self.test,
batch_size=self.batch_size,
steps=int(self.dataset_size / self.batch_size),
verbose=1
)
def train(self):
self.model.summary()
checkpoint = keras.callbacks.ModelCheckpoint(filepath, monitor='acc', verbose=1, mode='max')
self.model.fit(
self.training,
batch_size=self.batch_size,
epochs=self.epochs,
steps_per_epoch=int(self.dataset_size / self.batch_size),
callbacks=[checkpoint],
verbose=1
)
def predict(self, a):
return np.argmax(self.model.predict(a), axis=1)
A = Model('a', batch_size=100, shuffle_buffer_size=500, learning_rate=0.001, epochs=2)
B = Model('b', batch_size=100, shuffle_buffer_size=500, learning_rate=0.001, epochs=850)
if __name__ == "__main__":
B.prepare_dataset(df, dataframe_to_dataset_biomes)
B.create_model([64, 128])
B.compile()
# for inp, out in B.test.take(1).make_one_shot_iterator():
# print(inp, out)
# print(np.unique(nums))
# print(np.unique(predictions))
print('loss: {}, evaluation: {}'.format(*B.evaluate()))
# B.train()
A.prepare_dataset(df, dataframe_to_dataset_temp_precip)
A.create_model([4])
A.compile()
# A.train()